ICLR 2025 Past Other
ICLR 2025 Workshop on AI for Nucleic Acids
ICLR 2025 AI4NA
- Submission deadline
- Feb 14, 2025, 11:59 UTC imported from OpenReview — check the website for extensions
- Submission portal
- OpenReview
- Notes
- Auto-imported from the OpenReview venue record on 2026-06-10 — please verify and enrich (topics are keyword-guessed).
Accepted papers (35)
Fetched from OpenReview (v2) on 2026-06-10.
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A Comprehensive Library for RNA Structure-Function Modeling
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Accelerating Aptamer Discovery using a Transformer Based T5 Model: A Preliminary Study
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arowana: a transformer-based training framework for RNA basecalling and modification detection
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Bayesian Approximation of RNA Folding Times
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Benchmarking Fine-Tuned RNA Language Models for Intronic Branch Point Prediction
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Campolina: A Deep Neural Framework for Accurate Segmentation of Nanopore Signals
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Character-level Tokenizations as Powerful Inductive Biases for RNA Foundational Models
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Crypto-ncRNA: Non-coding RNA (ncRNA) Based Encryption Algorithm
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Decision Tree Induction with Dynamic Feature Generation: A Framework for Interpretable DNA Sequence Analysis
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Differentiable Folding for Nearest Neighbor Model Optimization
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Enhancing DNA Foundation Models to Address Masking Inefficiencies
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EvoFlow-RNA: Generating and Representing non-coding RNA with a Language Model
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FFPEnet: Somatic variant calling in FFPE tumor samples using deep transfer learning
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Flexible Models of Functional Annotations to Variant Effects using Accelerated Linear Algebra
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From Mutation to Degradation: Predicting Nonsense-Mediated mRNA Decay with NMDEP
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GENATATOR: de novo Gene Annotation With DNA Language Model
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Gumbel-Softmax Score and Flow Matching for Discrete Biological Sequence Generation
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HARMONY: A Multi-Representation Framework for RNA Property Prediction
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HyperGenie: A method for predicting enzymatic gene essentiality using hypergraph neural networks and genome-scale metabolic models
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InfoSEM: A Deep Generative Model with Informative Priors for Gene Regulatory Network Inference
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Long-range gene expression prediction with token alignment of large language model
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MoXGATE: Modality-Aware Cross-Attention for Multi-Omic Gastrointestinal Cancer Subtype Classification
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On inputs to deep learning for RNA 3D structure prediction
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Protriever: End-to-End Differentiable Protein Homology Search for Fitness Prediction
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ProtRNA: A Protein-derived RNA Language Model by Cross-Modality Transfer Learning
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Re-purposing GNNome: Genome Assembly Postprocessing (GAP)
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RiboGen: RNA Sequence and Structure Co-Generation with Equivariant Multiflow
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RNAGym: Benchmarks for RNA Fitness and Structure Prediction
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RNAlign: Alignment of tumor and cell line transcriptomes using conditional VAEs
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scContrast: A contrastive learning based approach for encoding single-cell gene expression data
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siRNA-mRNA dual diffusion model for RNAi drug design
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SPACE: Your Genomic Profile Predictor is a Powerful DNA Foundation Model
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Understanding DNA Discrete Diffusion for Engineering Regulatory DNA Sequences
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VirProBERT: A Sequence Language Model for Predicting Viral Hosts
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Zero-Shot Extrapolation in State-Space Models for Long-Range Genomics